Barely Significant

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In addition to ADCVI activity, we found a significant correlation with anti-Env CD4+ T-cell response after the second cycP-gp120 immunization, as well as a positive trend in anti-V2 antibodies with delayed SHIV acquisition, supporting recent studies highlighting the importance of V2-specific antibodies in the human efficacy trials 34 , 38 , 54 as well as both V2-specific antibodies and T-cell responses in non-human primate studies evaluating poxvirus/gp120 vaccination 55 , 56 .
The 672 candidates were ranked against these targets and a clear trend of the number of hits was observed across the 16 prodrugs; relatively few hits were observed for compounds 1 – 3 and 9 – 16 , with over half of the potential candidates producing hits for compounds 4 – 8 bearing masking groups at both 5’-hydroxyl and amino groups (Fig. 3a ).
While the levels of the mtDNA-encoded subunit, Cox2, was significantly decreased in psd1 Δ psd2 Δ and OM-Psd1 strains, the steady state abundance of the two additional mtDNA-encoded subunits, Cox1 and Cox3, trended towards a decrease in psd1 Δ, psd1 Δ psd2 Δ and OM-Psd1 that did not quite reach statistical significance (Supplementary Fig. 4 ).
Principal component analysis of relative metabolite abundance per cell revealed a strong trend across the 54 cell lines (PC1, 58.9% explained variance, Supplementary Fig. 2 ), which strongly correlates with cell line volumes derived from cell diameters measured in ref. 66 as well as with the herein determined adherent cell size area (Supplementary Fig. 2 , see Supplementary Note).
highly significantqualifiedgold
We observed that those genes are highly significant, regardless of the data set used (Supplementary Fig. 8b ), and that 100% of them have the exact same expression trend, i.e., meaning that genes found upregulated in the microarray data set were also found upregulated in the RNA-seq data set, and vice versa (Supplementary Fig. 8c ).