Barely Significant
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“nominally significant”

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p=0.08

Listed by Hankins (2013) · Otte et al. (2022)

In the literature

nominally significantP =0.0070.1× alphagold
When the rs1800532 variant was selected for attempted suicides, the heterogeneity decreased slightly (from 62.5–60.7%) and the pooled ORs showed a nominally significant harmful trend for the minor allele (1.22 (1.05–1.41), P =0.007, power of 99%) ( Figure 5 ).
nominally significantp = 0.007130.1× alphagold
For four of the known GWAS SNPs the associations in our African American breast cancer data had a nominally significant p-value less than 0.05 ( Table S4 ), namely rs13387042 at 2q35 (OR = 0.89; 95% CI = 0.82–0.97; p = 0.00713), rs865686 at 9q31 (OR = 0.92; 95% CI = 0.85–0.99; p = 0.0287), rs2981582 at 10q26 (OR = 1.11; 95% CI = 1.03–1.19; p = 0.0087), and rs2363956 at 19p13 (OR = 0.88; 95% CI = 0.82–0.95; p = 8.1×10 −4 ).
nominally significantP = 0.0080.2× alphagold
For multivariate models (CSS–multi, OS–multi, DFS–multi), Begg’s tests were non-significant and trim-and-fill did not impute additional studies (all k 0 = 0); although Egger’s test yielded a nominally significant P value for DFS–multi (P = 0.008), the absence of imputed studies and the similarity between original and adjusted estimates suggest that any small-study effects are unlikely to materially bias the results.
nominally significantp = 0.0080.2× alphagold
One rare single-nucleotide polymorphism (SNP), HugotSNP8ms2 (minor allele frequency <0.05), showed nominally significant deviations from HWE in the controls ( p = 0.008) and in the full sample ( p = 0.006) due to an overrepresentation of rare homozygotes, which might be the result of chance or genotyping error.
nominally significantp = 0.0080.2× alphagold
Additionally, in NAS score analysis in this region, we detected a novel eQTL marker for HSD17B13 (rs3923441) that was nominally significant with NAS score ( p = 0.008, beta = 0.55) (Additional file 1 : Table S3) and produced a PheWAS effect for abnormal liver enzyme levels (see the “ PheWAS approach ” section).
nominally significantp = 0.0080.2× alphagold
While far from genome-wide statistical significance for gene-based testing ( p < 2.7 × 10 −6 ), we found nominally significant associations of the predicted damaging CCR2 variants with myocardial infarction (OR: 0.60, 95%CI: 0.40–0.90, p = 0.008) and coronary artery disease (OR: 0.76, 95%CI: 0.59–0.99, p = 0.03), as well as directionally consistent associations with the odds of all other examined outcomes (ischemic stroke, peripheral artery disease, abdominal aortic aneurysm, Fig. 2 A).