Barely Significant

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highly significantP < 10 −50.0× alphaqualifiedgold
Interestingly, investigation of intragenic relationships between VastDB AS events reveals that pairs of cassette exons (especially in the case of neighboring exons) and pairs of retained introns within the same gene show highly significant correlation of inclusion or retention levels across samples from each species ( P < 10 −5 , Wilcoxon rank-sum test) ( Supplemental Fig.
highly significantp < 0.000010.0× alphaqualifiedgold
1 , Supplementary Figure S1 ).The modules were numbered in increasing order from 1 to 30 according to scores of the clustering algorithm 15 (Supplementary Table S1 ); 1 is assigned to the module with the highest score (most densely connected to each other).Next, we assessed whether genes of the clustered terms are significantly interconnected in physical interactions by comparing each of 30 modules with randomly generated networks having the same gene number of the corresponding module and confirmed the highly significant inter-connectivity of them 12 (Supplementary Figure S2 , S3 , p < 0.00001), meaning that their components are not randomly distributed in the interactome.
highly significantP <10 −50.0× alphaqualifiedgold
Variants were thus discarded if: (i) UCSC alignability ≠ 1 (100bp window size); (ii) variant within 10 bps of a simple repeat region; (iii) highly significant deviation from Hardy-Weinberg equilibrium (HWE) in cases or controls ( P <10 −5 ); (iv) no call rate significantly different between case-samples and control-samples ( P <10 −5 ); (v) no call rate across either case or control samples >0.03.