Barely Significant

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nominally significantp = 4.1 × 10 −40.0× alphagold
Phenome-wide association (PheWAS) of n = 10,168 phenotypes revealed nominally significant association of p.Arg1231Cys with ischemic stroke (OR [95%CI] = 4.0 [1.9, 8.6]), p = 4.1 × 10 −4 ), all strokes combined (OR [95% CI] = 1.9 [1.1, 3.5], p = 0.031), hypertension (ICD 10 code I10) (OR [95% CI] = 1.5 [1.1, 2.2], p = 0.019), and recurrent major depression (OR [95% CI] = 3.2 [1.5, 6.8], p = 0.0031) (Supplementary Data 2 ).
a strong trendp = 0.00060.0× alphagold
However, when sample datasets with no hypermutated sequences were excluded there was a strong trend for hypermutated sequences to decline with increasing viral loads: p = 0.0006 and 0.06 for gag at the first and second time windows, respectively, and p = 0.005 and 0.02 for env (Supplementary Fig. 4 ).
highly significantp = 0.000770.0× alphaqualifiedgold
When the comparison was performed within each grade, grades 1 and 2 showed highly significant positive correlations between these losses ( p = 0.00077 and p = 0.0093, respectively), while grade 3 did not show any and grade 4 showed a weak but significant correlation ( p = 0.044) (Fig. 7b and Supplementary Fig. 7 ).